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This repo is a list of papers that discuss errors in research due to software errors

TeX 93 12 Updated Dec 15, 2025

A Snakemake executor plugin for submitting jobs to a SLURM cluster

Python 45 41 Updated Dec 18, 2025

Documentation for the JSON Lines text file format

CSS 168 40 Updated Dec 2, 2025

A python GUI for custom training and prediction of AI models for automated taxonomic species descriptions

Python 9 Updated Sep 30, 2025

A simple registry for KGHub projects

Python 20 4 Updated Dec 22, 2025
JavaScript 5 4 Updated Apr 7, 2025

Descent 3 by Outrage Entertainment

C++ 2,968 271 Updated Oct 23, 2025

Prompts for field note transcription

Python 1 1 Updated Jan 5, 2024
Python 3 2 Updated Dec 12, 2025

A minimalistic opinionated Mastodon web client

JavaScript 1,375 148 Updated Dec 23, 2025

🐸 Idiomatic conversion between URIs and compact URIs (CURIEs) in Python

Python 26 7 Updated Dec 22, 2025
Jupyter Notebook 5 1 Updated Jun 27, 2023

Postgres Explain Visualizer 2

TypeScript 3,262 170 Updated Dec 22, 2025
TypeScript 42 7 Updated Apr 24, 2023

documentation for heal investigators on how to complete the heal study level core metadata CEDAR form created by the platform following initial study registration on the platform

2 5 Updated Apr 25, 2025

HEAL Study-level core metadata

HTML 4 6 Updated Jul 17, 2025

public documentation for the HEAL platform (healdata.org)

HTML 2 7 Updated Oct 28, 2025

A service for finding CURIEs from lexical strings.

Python 4 3 Updated Dec 19, 2025

Web service API for the NCATS Data Translator CAM-KP

Scala 2 2 Updated May 5, 2024

Babel creates cliques of equivalent identifiers across many biomedical vocabularies.

Python 12 3 Updated Dec 20, 2025

Service that produces Translator compliant nodes given a curie

Python 15 8 Updated Dec 18, 2025
Jupyter Notebook 2 6 Updated Jul 23, 2024

A stitching platform for InXight

Java 15 8 Updated Mar 28, 2025

A static site generator for SPARQL backends.

Go 136 12 Updated Aug 18, 2025

Data API for LinkML instance data

Python 5 1 Updated Feb 27, 2024

SKOS-Play allows to print SKOS files in HTML or PDF. It also embeds xls2rdf to generate RDF from Excel.

Java 77 14 Updated May 25, 2025

Java JsonPath implementation

Java 9,358 1,713 Updated Oct 31, 2025

A standardized browser-based spreadsheet editor and validator that can be run offline and locally, and which includes templates for SARS-CoV-2 and Monkeypox sampling data. This project, created by …

JavaScript 117 33 Updated Dec 17, 2025

Sketching out an RDF representation for FHIR

HTML 44 10 Updated Jul 4, 2025

NMDC Sample Annotator

Python 6 9 Updated Apr 22, 2025
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