Bioinformatic MCP server that wraps the most useful functions of the gget library

Implementation of AlphaGenome, Deepmind's updated genomic attention model

The absolute trainer to light up AI agents.

Ralph is an autonomous AI agent loop that runs repeatedly until all PRD items are complete.

A PyTorch library for implementing flow matching algorithms, featuring continuous and discrete flow matching implementations. It includes practical examples for both text and image modalities.

TorchCFM: a Conditional Flow Matching library

Repo for the Claude Code Marketplace to use with the Claude for Life Sciences Launch. This will continue to host the marketplace.json long-term, but not the actual MCP servers.

A light-weight and powerful meta-prompting, context engineering and spec-driven development system for Claude Code and OpenCode.

Fast, Accurate, Lightweight Python library to make State of the Art Embedding

Manage multiple AI terminal agents like Claude Code, Aider, Codex, OpenCode, and Amp.

🌊 The leading agent orchestration platform for Claude. Deploy intelligent multi-agent swarms, coordinate autonomous workflows, and build conversational AI systems. Features enterprise-grade archite…

Spec-driven development (SDD) for AI coding assistants.

A Python library for fast and easy access to genomic resources such as sequence, data tracks, and annotations

verl: Volcano Engine Reinforcement Learning for LLMs

RAGEN leverages reinforcement learning to train LLM reasoning agents in interactive, stochastic environments.

Derivative-Free Guidance in Diffusion Models with Soft Value-Based Decoding. For controlled generation in DNA, RNA, proteins, molecules (+ images)

Analyzing Hacker News discussions from a decade ago in hindsight with LLMs

Github repository for nanoSPLITS manuscript data and R scripts

Analysis and method implementation for exploring private information leakage from single-cell RNA-seq count matrices

Latent Collaboration in Multi-Agent Systems

deep residual neural network for classifying the pathogenicity of missense mutations.

A foundation model for spatial transcriptomics. It generates contextual gene representations within single cell and spatial niche.

Variant-aware CRISPR off-target nomination

FlashRNA - An Efficient Model for Regulatory Genomics

Context-Aware Regularization with Markovian Integration for Attention-Based Nucleotide Analysis [NeurIPS2025]

DNA sequences in a multiple sequence alignment transformer.