Linear optimization software

RFMIX - Local Ancestry and Admixture Inference Version 2

Sampling and inference of genealogies with recombination

Genotype Representation Graph Library

Pedigree simulator

Algorithm for rapid, phase-free detection of long identical by descent segments

H2Opus: a performance-oriented library for hierarchical matrices

Parallel Genomic evaluations in R

Efficient Local Ancestry Inference

Rcpp Integration for the Blaze High-Performance C++ Math Library

Calculates the probability of a haplotype given a population reference panel

Efficient algebraic functions for statistical analysis of genomic data

Demographic inference from Ancestral Recombination Graphs (ARGs)

Program for calculating phase switch error rate

Developmental version of HAPI with eventual support for families without parental data

infer realized kinship via latent IBD states

Efficient large scale phenotype simulator