Stars
DuckDB is an analytical in-process SQL database management system
⚡ A Fast, Extensible Progress Bar for Python and CLI
Turn (almost) any Python command line program into a full GUI application with one line
Code samples for my book "Neural Networks and Deep Learning"
Essential Cheat Sheets for deep learning and machine learning researchers https://medium.com/@kailashahirwar/essential-cheat-sheets-for-machine-learning-and-deep-learning-researchers-efb6a8ebd2e5
A desktop application for viewing and analyzing tabular data
List of papers about Proteins Design using Deep Learning
Listing of papers about machine learning for proteins.
List of papers studying machine learning through the lens of category theory
ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using Transformers Models.
A macOS GUI front-end for the YT-DLP video downloader
Versatile open-source tool for microbiome analysis
Quickly search, compare, and analyze genomic and metagenomic data sets.
A dependency-free cross-platform swiss army knife for PDB files.
HMMER: biological sequence analysis using profile HMMs
An updated pipeline for pangenome investigation
A collection of research papers for AI-based protein design
The official implementation of the NeurIPS'23 paper ProteinInvBench: Benchmarking Protein Design on Diverse Tasks, Models, and Metrics
A curated list of online chemical engineering education resources
Cython bindings and Python interface to HMMER3.
An open-access bioinformatics text
Interactive quality assessment of genome assemblies
A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design
A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data
🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primary sources.
A Rust library providing fully dynamic sets of k-mers with high locality
Python package to manage protein structures and their annotations