Stars
A Python library for simulation and Bayesian estimation of models with time-varying parameters.
Simulator of the pyloric network in cython.
The random graph model to infer cell-cell communication networks based on bulk RNA-seq data. Contains the code used for the "Mathematically mapping the network of cells in the tumor microenvironmen…
Bayesian Evolutionary Analysis Sampling Trees
scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics
R package providing statistical tests for covariance and correlation matrices and their structures
A Claude or Codex skill for deliberate skill development during AI-assisted coding
Tools for working with the pop-cosmos galaxy population model
Open code associated to the article "Saddlepoint Monte Carlo and its application to ecological inference" (Voldoire, Chopin, Ryder)
Multi-Joint dynamics with Contact. A general purpose physics simulator.
Master the command line, in one page
TORAX: Tokamak transport simulation in JAX
Package for dynamical modeling of power grids
Ultimate Time Tracker - A simple command-line time tracker written in Python
CasADi is a symbolic framework for numeric optimization implementing automatic differentiation in forward and reverse modes on sparse matrix-valued computational graphs. It supports self-contained …
Zotero is a free, easy-to-use tool to help you collect, organize, annotate, cite, and share your research sources.
[ICML2026] The first, fully verified, sorry-free, large-scale Lean 4 library for statistical learning theory, covering infrastructures for mordern statistics and learning theory.
Code and data for the manuscript "A counterfactual analysis quantifying the COVID-19 vaccination impact in Sweden"
Julia package for simulation-based, likelihood-free parameter inference using neural networks.
Database with posteriors of interest for Bayesian inference
Lorentz-Equivariance without Limitations
brms R package for Bayesian generalized multivariate non-linear multilevel models using Stan
Scripts to analyze a user's Bluesky Network