A R package for splitting, applying and combining large problems into simpler problems

Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.

Row-oriented workflows in R with the tidyverse

R Source Code

karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome

🧬 immunarch [R package] – Multi-Modal Immune Repertoire Analytics for Immunotherapy and Vaccine Design

A 'ggplot2' implement of Venn Diagram.

Pretty heatmaps

Multi-Omics Factor Analysis

Format R Code Automatically

An Arsenal of 'R' Functions for Large-Scale Statistical Summaries

A collection of scripts and notes related to genomics and bioinformatics

R package to add 'dplyr'-like Syntax for Summary Statistics of Survey Data

Genome data visualizations

Command-line interface description language for R (http://docopt.org)

Pry open the covers of R

A Toolbox for Non-Tabular Data Manipulation

Chunkwise Text-file Processing for 'dplyr'

deconstructSigs

Create and combine tables with a ggplot2/patchwork syntax.

Talk about general debugging strategies. How to be less confused and frustrated.

Analysis pipeline for cancer sequencing data

A single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.

R package for extracting and visualizing mutational patterns in base substitution catalogues

R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE

R package containing useful functions for mutational signature analysis

dataCompareR is an R package that allows users to compare two datasets and view a report on the similarities and differences.

Somatic copy variant caller (CNV) for next generation sequencing

R package designed to simplify structural variant analysis

An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.