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studying cancer genomics
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studying cancer genomics

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28 stars written in Jupyter Notebook
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Python Data Science Handbook: full text in Jupyter Notebooks

Jupyter Notebook 46,328 18,646 Updated Jun 26, 2024

aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)

Jupyter Notebook 28,351 7,957 Updated Jun 25, 2024

The fastai deep learning library

Jupyter Notebook 27,723 7,679 Updated Dec 15, 2025

⛔️ DEPRECATED – See https://github.com/ageron/handson-ml3 instead.

Jupyter Notebook 25,801 12,877 Updated Oct 3, 2023

Instruct-tune LLaMA on consumer hardware

Jupyter Notebook 18,984 2,215 Updated Jul 29, 2024

TensorFlow Tutorials with YouTube Videos

Jupyter Notebook 9,278 4,135 Updated Jan 15, 2021
Jupyter Notebook 8,756 626 Updated Oct 25, 2025

100 days of algorithms

Jupyter Notebook 7,501 1,176 Updated May 11, 2018

A curated list of applied machine learning and data science notebooks and libraries across different industries (by @firmai)

Jupyter Notebook 7,427 1,242 Updated Oct 4, 2024

From the basics to slightly more interesting applications of Tensorflow

Jupyter Notebook 5,669 1,169 Updated Dec 11, 2021

Plain python implementations of basic machine learning algorithms

Jupyter Notebook 4,403 834 Updated Jun 27, 2024

The Jupyter Notebooks behind my OReilly report, "A Whirlwind Tour of Python"

Jupyter Notebook 3,944 1,705 Updated Jan 31, 2024

Datasets, tools, and benchmarks for representation learning of code.

Jupyter Notebook 2,399 410 Updated Jan 31, 2022

Materials for my scikit-learn tutorial

Jupyter Notebook 1,810 961 Updated Mar 23, 2023

Large Language Models (LLMs) tutorials & sample scripts, ft. langchain, openai, llamaindex, gpt, chromadb & pinecone

Jupyter Notebook 893 311 Updated May 2, 2025

Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported from diverse biomedical databases 2) automate knowledge disco…

Jupyter Notebook 570 120 Updated Sep 11, 2025

Reference mapping for single-cell genomics

Jupyter Notebook 396 66 Updated Dec 2, 2025

GCP for Bioinformatics Researchers

Jupyter Notebook 282 75 Updated May 29, 2025

Python computations in science and engineering

Jupyter Notebook 266 71 Updated Dec 16, 2025

dbSNP

Jupyter Notebook 142 48 Updated Jun 21, 2024

Small Dataset Benchmarks on the Dataset of Datasets UCI++

Jupyter Notebook 93 17 Updated Jul 29, 2022

Public data for the book Python for Bioinformatics

Jupyter Notebook 72 50 Updated Jan 5, 2021

Manager for multi-container computing environments

Jupyter Notebook 25 2 Updated Oct 20, 2024

MSKCC Reis-Filho Lab pipeline thingy

Jupyter Notebook 18 13 Updated Sep 22, 2025

Codes and Data for FFPEsig manuscript

Jupyter Notebook 17 5 Updated Jan 17, 2024

Setton, Hadi, Choo et al Nature 2023

Jupyter Notebook 4 Updated Jun 6, 2023
Jupyter Notebook 1 1 Updated Nov 4, 2025