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  • Founder at Shaperk
  • Cyberjaya, Malaysia

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@Laravel-Bangladesh

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istiyakamin/README.md

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🧬 About Me

I'm Istiyak Amin Santo — a researcher and engineer working at the intersection of deep learning and biomedical imaging.

Currently completing my Master's by Research in AI (CGPA 4.0/4.0) at Multimedia University, Malaysia, I am pursuing a PhD focused on Advanced Deep Learning for Super-Resolution X-Nuclei MRI Reconstruction — a clinically significant challenge where AI can enable metabolic imaging of nuclei like ²³Na, ³¹P, and ³⁹K that standard MRI scanners struggle to resolve.

My background bridges research-grade AI (transformers, CNNs, XAI, medical imaging, computational pathology) with production engineering (full-stack, DevOps, blockchain). I am an IEEE-indexed author, a Gold Medalist at iNVENTEX Innovation Exhibition 2025, and a Three Minute Thesis Finalist at MMU.

Vision: Build clinically trustworthy AI systems that make non-proton MRI viable for early diagnosis of cancer, neurodegeneration, and metabolic disease.


🔬 PhD Research

Topic:  Advanced Deep Learning Methods for Super-Resolution
        Data Reconstruction for X-Nuclei (Non-Proton) MRI Imaging

X-Nuclei MRI (²³Na, ³¹P, ⁷Li, ³⁹K) reveals biochemical and metabolic information that proton MRI cannot — but suffers from inherently low SNR, sparse k-space data, and prohibitively long acquisition times. My PhD directly addresses these bottlenecks using deep learning.

🧩 Research Pillars

Area Methods
Super-Resolution Reconstruction CNN, Vision Transformer & Diffusion-based SR for 3D MRI volumes
Sparse K-Space Learning Deep unrolling, compressed sensing + neural networks
Physics-Informed Deep Learning Embedding MRI relaxometry & k-space priors into network design
Multi-Modal Fusion Using ¹H proton MRI as structural guidance for X-Nuclei enhancement
Uncertainty Quantification Bayesian networks & ensembles for clinical-grade reliability
Explainability (XAI) Grad-CAM++, SHAP, Integrated Gradients for model interpretability

🏥 Clinical Impact Areas

  • Oncology — Tumor metabolism mapping via ³¹P MRS
  • Neurology — Stroke penumbra & neurodegeneration via ²³Na MRI
  • Cardiology — Myocardial viability & tissue energetics
  • Psychiatry — Lithium (⁷Li) distribution monitoring in bipolar disorder

📄 Publications

IEEE Scopus-Indexed | Under Review in Q1 Journals

Journal Papers (Under Review)

  • 📘 Tri-Objective Co-optimization of Waste-Cooking-Oil Biodiesel Using Machine Learning, NSGA-II, and Life-Cycle AssessmentEnergy Reports
  • 📘 Risk-Aware Route Optimization for Waste Cooking Oil CollectionWaste Management

Conference Papers (Accepted — IEEE InCIT 2025, Scopus)

  • 📗 Travelling Salesman Problem: Classical to Quantum Era — A Comparative Review of Algorithms and Computational Complexity
  • 📗 Hybrid Deep Learning Framework for Multi-Class Breast Cancer Scoring Using Grad-CAM++
  • 📗 Real-Time Nuclei Classification and Allred Scoring in PR-IHC Stained Breast Cancer Histopathology Images

🏆 Awards & Recognition

Award Year
🥇 Gold Medal — iNVENTEX Innovation Exhibition (Biofuel LCA Toolkit) 2025
🎤 Finalist — Three Minute Thesis (3MT) Competition, MMU 2025
🎓 Fully Funded Government Linked University (GLU) Research Grant 2024–2025
📊 CGPA 4.0/4.0 — MSc by Research in Artificial Intelligence, MMU 2024–2025

⚙️ Technical Skills

🤖 AI & Deep Learning

PyTorch TensorFlow Keras PyTorch Lightning scikit-learn XGBoost LightGBM

🏥 Medical Imaging & Explainable AI

Grad-CAM SHAP LIME Captum OpenCV DICOM

💻 Engineering, Data & DevOps

Python Go PHP R Docker FastAPI MLflow AWS PostgreSQL Streamlit

⚛️ Quantum Computing

Qiskit PennyLane Cirq


🚀 Career Timeline

Role Organization Period
🎓 PhD Researcher (pursuing) Biomedical AI — X-Nuclei MRI Reconstruction 2026 →
🔬 Graduate Research Assistant Data Science Lab, Multimedia University, Malaysia Jul 2024 – Jun 2026
💼 Full Stack Developer Royal Recruiter (Remote) Mar 2023 – May 2024
⛓️ Blockchain Developer King Apps Studio, Malaysia Dec 2021 – Jul 2022
🌐 Web Developer Chief ERP System Sep 2017 – Nov 2021

🎓 Education

Degree Institution Result
🔬 MSc by Research — Artificial Intelligence Multimedia University, Malaysia CGPA 4.0/4.0
💻 BSc — Computer Science & Engineering Port City International University, Bangladesh CGPA 3.63/4.0
⚡ Diploma — Electronics Engineering Chittagong Polytechnic Institute CGPA 3.01/4.0

📊 GitHub Stats


🤝 Open to Collaboration

I am actively looking to connect with:

  • 🏥 Clinicians & Radiologists — seeking AI tools for MRI enhancement or pathology analysis
  • 🔬 Medical Imaging Researchers — joint work on X-Nuclei MRI, histopathology AI, SR reconstruction
  • 🚀 Healthtech Startups & VCs — building AI-powered diagnostic and imaging tools
  • 🎓 PhD Programs & Labs — in computational pathology, medical image analysis, or biomedical AI

What I bring: Research rigor (IEEE publications, CGPA 4.0) + engineering depth (production systems, MLOps) + biomedical domain knowledge — a rare combination for a researcher at this stage.

📬 Reach me: LinkedIn


"The best diagnostic tool is one the clinician never has to think about — it just works."

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  1. awesome-x-nuclei-super-resolution awesome-x-nuclei-super-resolution Public

    A curated, community-driven resource for super-resolution reconstruction in X-nuclei MRI (²³Na, ¹³C, ³¹P, ¹⁹F)

  2. oservo/aiFi oservo/aiFi Public template

    A Multi Layer Perceptron (MLP) Artificial Neural Network (ANN) Framework Developed in C for Machine Learning (ML) and Deep Learning (DL)

    C 11 5

  3. SumonMSelim/server-automation SumonMSelim/server-automation Public archive

    Collection of shell scripts to make your life easier as a developer or system administrator.

    Shell 70 33

  4. number2word number2word Public

    An simple package to convert numbers to words in Golang. e.g. one thousand twenty four

    Go 11