Linux kernel source tree

For developers, who are building real-time data-driven applications, Redis is the preferred, fastest, and most feature-rich cache, data structure server, and document and vector query engine.

Git Source Code Mirror - This is a publish-only repository but pull requests can be turned into patches to the mailing list via GitGitGadget (https://gitgitgadget.github.io/). Please follow Documen…

The official NGINX Open Source repository.

General purpose TLS and crypto library

Zstandard - Fast real-time compression algorithm

Cross-platform asynchronous I/O

Extremely Fast Compression algorithm

A simple logging library implemented in C99

This is a repository for the code posted on my blog

Modest is a fast HTML renderer implemented as a pure C99 library with no outside dependencies.

BWK awk modified for biological data

PCG — Minimal C Implementation

PCG — C Implementation

Align proteins to genomes with splicing and frameshift

TCR and BCR assembly from RNA-seq data

Isocline is a portable GNU readline alternative

Fast taxonomic classification of metagenomic sequencing reads using a protein reference database

An efficient trie implementation.

The libsais library provides fast linear-time construction of suffix array (SA), generalized suffix array (GSA), longest common prefix (LCP) array, permuted LCP (PLCP) array, Burrows-Wheeler transf…

Interval data structure

WFA-lib: Wavefront alignment algorithm library v2

Constructing a pangenome gene graph

A tool set for short variant discovery in genetic sequence data.

Detecting sites of genomic enrichment

Pairwise SNP distance matrix from a FASTA sequence alignment

Tools to work with GWAS-VCF summary statistics files

This repo is DEPRECATED. Please use minimap2, the successor of minimap.

Benchmarking matrix multiplication implementations