UCSC command line bioinformatic utilities

Transformers 3rd Edition

Personal Cancer Genome Reporter (PCGR)

FASTQ compression

This repository contains data indexes from NIST's Genome in a Bottle project.

tools for working with genome variation graphs

Genomics Workflows on AWS

Docker container for Illumina bcl2fastq

awesome-bio-datasets

Webin XML and JSON API.

A Kubernetes controller for Elastic Load Balancers

A program for summarising CpG methylation patterns

This repository contains chromosome/contig name mappings between UCSC <-> Ensembl <-> Gencode for a variety of genomes.

🍯 T-Pot - The All In One Multi Honeypot Platform 🐝

Javascript library for browser to S3 multipart resumable uploads

Modern Honey Network

🚀 A fast and lightweight utility and Python library for downloading posts, stories, and highlights from Instagram.

Example Nextflow pipelines and programming techniques

This repository contains code and configuration samples (e.g. .ebextensions) for AWS Elastic Beanstalk.

Example application code for the python architecture book

🔥 A highly scalable, offline-first foundation with the best developer experience and a focus on performance and best practices.

Simple, powerful online communities.

A serverless app that sets up an AWS CodePipeline pipeline for a given GitHub repo. This app allows people developing SAM applications to quickly get CodePipeline-based CD setup for their project.

Indico - A feature-rich event management system, made @ CERN, the place where the Web was born.

A curated list of awesome Flask resources and plugins

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation

A curated list of awesome Amazon Web Services (AWS) libraries, open source repos, guides, blogs, and other resources. Featuring the Fiery Meter of AWSome.

ENCODE ATAC-seq pipeline

A DSL for data-driven computational pipelines