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nimarafati / Xenium_benchmarking

Forked from Moldia/Xenium_benchmarking

Code used to benchmark Xenium

Jupyter Notebook 2 Updated Jun 24, 2024

LankyCyril / pyvenn

Forked from tctianchi/pyvenn

Python module for plotting Venn diagrams of 2..6 sets

Jupyter Notebook 130 30 Updated Jun 15, 2022

dpeerlab / PhenoGraph

Forked from jacoblevine/PhenoGraph

Subpopulation detection in high-dimensional single-cell data

Python 71 28 Updated Oct 5, 2020

dpeerlab / wishbone

Forked from ManuSetty/wishbone

Wishbone is an algorithm to align cells along developmental trajectories with branches

Jupyter Notebook 19 8 Updated May 14, 2020

AllonMKlein / scrublet

Forked from swolock/scrublet

Detect doublets in single-cell RNA-seq data

Jupyter Notebook 86 24 Updated Jul 3, 2019

scfurl / f-scLVM

Forked from bioFAM/slalom
Jupyter Notebook 5 1 Updated Feb 24, 2017