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phyloblitz Public
Rapid SSU rRNA marker gene screening of long read metagenomes
Python MIT License UpdatedDec 19, 2025 -
bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell MIT License UpdatedDec 19, 2025 -
staged-recipes Public
Forked from conda-forge/staged-recipesA place to submit conda recipes before they become fully fledged conda-forge feedstocks
Python BSD 3-Clause "New" or "Revised" License UpdatedDec 19, 2025 -
IsoTools2 Public
Forked from HerwigLab/IsoTools2IsoTools is a python module for Long Read Transcriptome Sequencing (LRTS) analysis.
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bioconda-docs Public
Forked from bioconda/bioconda-docsDocumentation for bioconda
SCSS MIT License UpdatedNov 27, 2025 -
pytransaln Public
Forked from monagrland/pytransalnTranslation-guided nucleotide alignment for coding sequences
Python MIT License UpdatedNov 25, 2025 -
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Teochew-Rime Public
Forked from Language-Preservation-Community/Teochew-Rime潮语拼音输入法 - Rime schema for Teochew dialect - https://kahaani.github.io/dieghv
GNU General Public License v3.0 UpdatedMar 22, 2025 -
isoseq Public
Forked from nf-core/isoseqGenome annotation with PacBio Iso-Seq. Takes raw subreads as input, generate Full Length Non Chemiric (FLNC) sequences and produce a bed annotation.
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ppsdb-globi-export Public
Export of the Protist-Prokaryote Symbiosis Database for indexing by GloBI
Python UpdatedSep 6, 2024 -
MD Public
Forked from DamienFinn/MDMetagenomic diversity index calculator and example .faa contig data.
Python UpdatedSep 6, 2024 -
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MB_Pipeline Public
Forked from monagrland/MB_PipelineMetabarcoding Pipeline for Illumina Sequencing Data
Python GNU Affero General Public License v3.0 UpdatedMay 21, 2024 -
biopython Public
Forked from biopython/biopythonOfficial git repository for Biopython (originally converted from CVS)
Python Other UpdatedFeb 23, 2024 -
lark-railroad Public
Forked from MegaIng/lark-railroadA railroad diagram generator from lark grammars
HTML UpdatedFeb 15, 2024 -
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toy-wf Public
troubleshooting containerization of Snakemake workflow with a global conda directive
Dockerfile UpdatedFeb 12, 2024 -
snakemake Public
Forked from snakemake/snakemakeThis is the development home of the workflow management system Snakemake. For general information, see
HTML MIT License UpdatedJan 12, 2024 -
wdqsutils Public
Generate Wikidata QuickStatements for housekeeping tasks
Python MIT License UpdatedDec 2, 2023 -
documentation Public
Forked from GeoNode/documentationGeoNode Documentation
Python Other UpdatedNov 17, 2023 -
phyloFlash Public
Forked from HRGV/phyloFlashphyloFlash - A pipeline to rapidly reconstruct the SSU rRNAs and explore phylogenetic composition of an illumina (meta)genomic dataset.
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DiscoSnp Public
Forked from GATB/DiscoSnpDiscoSnp is designed for discovering all kinds of SNPs (not only isolated ones), as well as insertions and deletions, from raw set(s) of reads.
Python GNU Affero General Public License v3.0 UpdatedMay 9, 2023 -
whokaryote Public
Forked from LottePronk/whokaryoteClassify metagenomic contigs as eukaryotic or prokaryotic
Python GNU Affero General Public License v3.0 UpdatedJan 3, 2023 -
gbtquick Public
Forked from Swart-lab/gbtquicklazy person's blobtools2
Python MIT License UpdatedJan 3, 2023 -
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