ESP32-optimized variant of the Tamp lossless compression library.

A ggplot2 based biplot for principal components-like methods

Rmarkdown support for vim

hifiasm_meta - de novo metagenome assembler, based on hifiasm, a haplotype-resolved de novo assembler for PacBio Hifi reads.

A stable place for guidance source code http://guidance.tau.ac.il/ver2/source.php

Linux KMS/DRM based virtual Console Emulator

Assembler for raw de novo genome assembly of long uncorrected reads.

Linear mixed model for genomic analyses.

Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment

An application for editing R markdown documents that is accessible for blind people using screen reading software.

The x86 processor fuzzer

This is the home of the ClockstaR package

the z in bioinformatics

List of single-file C/C++ libraries.

cwl2zshcomp generates ZSH auto completions

Secretgrind: a Valgrind analysis tool to detect secrets in memory

tiny HTTP parser written in C (used in HTTP::Parser::XS et al.)

Simple constant key/value storage library, for read-heavy systems with infrequent large bulk inserts.

Declarative statistical visualization library for Python

The personal, minimalist, super-fast, database free, bookmarking service - community repo

Bioinformatics and Computational Biology Infrastructure for Julia

Talk on building BAAD at ESA2015: https://kaigi.eventsair.com/QuickEventWebsitePortal/esa2015/esa2015/Agenda

Command line interface to and serialization format for Blosc

A pipeline for extracting SSU rRNA gene from wgs data and applying them for further diversity analysis

Inspect kallisto RNA-Seq output

Super fast C++ logging library.

Spaced seed version of Kraken taxonomic sequence classification system

Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using lightweight alignments