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Tufts Medical Center
- Boston, MA
- http://blog.bonham.ch
- https://orcid.org/0000-0003-3200-7533
- @kevinbonham.com
- @Kbonham@scicomm.xyz
Highlights
- Pro
Stars
Read-based functional profiling of microbiome sequencing data
Scientific Inkscape: Inkscape extensions for figure resizing and editing
Transparent, NumPy-only deep learning framework for teaching, small-scale projects, prototyping, and reproducible experiments. No CUDA, no giant dependency tree. Batteries included: VJP autograd, l…
paris - world's first decentralized trained open-weight diffusion model
A modular Python toolkit for mining UniProt protein data and converting it into machine-learning ready features. Handles everything from HUMAnN outputs to clean numerical representations (embedding…
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Zotero plugin to automatically move attachments and link them
A flexible pipeline for complete analysis of bacterial genomes
Dashboard for NIH changes since January 20, 2025
Zeioth / wofi-emoji
Forked from dln/wofi-emojiEmoji picker for Wayland using wofi and wl-clipboard
High performance self-hosted photo and video management solution.
Simple and efficient SDF calculation.
Get the contributor stats summary from all repos of any given organization
General bibliography manager in pure Julia
Text and code for the second edition of Think Bayes, by Allen Downey.
Assembly and annotation of metatranscriptomic or metagenomic data for prokaryotic, eukaryotic and viruses.
Retrieve author and publication information from Google Scholar in a friendly, Pythonic way without having to worry about CAPTCHAs!
A new language server for Julia, enabling modern, compiler-powered tooling.
Intensive Julia workshop that takes you from zero to hero
Code needed to reproduce results of BinBencher paper
Import all tweets exported from X/Twitter to a Bluesky account.
Mirror of https://code.tecosaur.net/tec/RestClient.jl