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Showing results

Read-based functional profiling of microbiome sequencing data

Nextflow 1 1 Updated Dec 12, 2025

Scientific Inkscape: Inkscape extensions for figure resizing and editing

Python 760 23 Updated Dec 21, 2025

Transparent, NumPy-only deep learning framework for teaching, small-scale projects, prototyping, and reproducible experiments. No CUDA, no giant dependency tree. Batteries included: VJP autograd, l…

Python 5 1 Updated Dec 7, 2025

paris - world's first decentralized trained open-weight diffusion model

52 2 Updated Oct 7, 2025

A modular Python toolkit for mining UniProt protein data and converting it into machine-learning ready features. Handles everything from HUMAnN outputs to clean numerical representations (embedding…

Python 1 1 Updated Dec 1, 2025

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

Nextflow 1,176 829 Updated Dec 19, 2025

Zotero plugin to automatically move attachments and link them

JavaScript 1,118 23 Updated Dec 12, 2025

A flexible pipeline for complete analysis of bacterial genomes

Nextflow 492 79 Updated Dec 19, 2025

Dashboard for NIH changes since January 20, 2025

HTML 1 Updated Oct 7, 2025

Emoji picker for Wayland using wofi and wl-clipboard

Shell 83 16 Updated Nov 30, 2024

High performance self-hosted photo and video management solution.

TypeScript 87,363 4,604 Updated Dec 25, 2025
Python 100 16 Updated Sep 16, 2025

Simple and efficient SDF calculation.

Julia 27 7 Updated Apr 27, 2023

Get the contributor stats summary from all repos of any given organization

Go 243 31 Updated Dec 15, 2025

General bibliography manager in pure Julia

Julia 5 Updated Jun 25, 2021

Text and code for the second edition of Think Bayes, by Allen Downey.

Jupyter Notebook 1,986 1,533 Updated Dec 24, 2025

Assembly and annotation of metatranscriptomic or metagenomic data for prokaryotic, eukaryotic and viruses.

Nextflow 34 17 Updated Nov 20, 2025

Retrieve author and publication information from Google Scholar in a friendly, Pythonic way without having to worry about CAPTCHAs!

Python 1,755 345 Updated Apr 28, 2025

A new language server for Julia, enabling modern, compiler-powered tooling.

Julia 212 10 Updated Dec 25, 2025

Intensive Julia workshop that takes you from zero to hero

Jupyter Notebook 200 44 Updated Oct 13, 2025

Code needed to reproduce results of BinBencher paper

TeX 1 1 Updated Mar 25, 2025

Import all tweets exported from X/Twitter to a Bluesky account.

TypeScript 629 40 Updated Sep 10, 2025

The Social Web Toolkit

Go 189 15 Updated Dec 24, 2025

Mirror of https://code.tecosaur.net/tec/RestClient.jl

Julia 18 Updated Aug 14, 2025

Julia for HPC Course @ UCL ARC

Jupyter Notebook 93 4 Updated Mar 7, 2024
Julia 38 4 Updated Nov 24, 2025
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