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7 stars written in R
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Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file form…

R 1,421 616 Updated May 31, 2023

Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)

R 323 83 Updated Feb 10, 2026

Inferring, interpreting and visualising trajectories using a streamlined set of packages 🦕

R 185 34 Updated Jun 24, 2021

URD - Reconstruction of Branching Developmental Trajectories

R 127 41 Updated Jun 29, 2021

Reconstruction of complex single-cell trajectories using CellRouter

R 46 21 Updated Dec 14, 2018

WGCNA for RNAseq data

R 3 Updated Nov 21, 2025