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Framework to process and call somatic variation from NGS dataset generated using MSK-IMPACT assay
an empirical Bayesian framework for mutation detection from cancer genome sequencing data
An et al. Nature Communications 2023
linhxxx / VEP_plugins
Forked from Ensembl/VEP_pluginsPlugins for the Ensembl Variant Effect Predictor (VEP)
linhxxx / vcf2maf
Forked from mskcc/vcf2mafConvert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms