Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)

SkillGym: Training Skill-Use Agents with Automatic Verifiable Environment Generation

Official SGLang x Datawhale course on LLM inference: understand inference, build a mini-sglang from scratch, then read the real SGLang source and land your first PR. Available in English and Chinese.

[ICLR 2024] Protein-Ligand Interaction Prior for Binding-aware 3D Molecule Diffusion Models

Secure, Fast, and Extensible Sandbox runtime for AI agents.

This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-shot active learning.

Multimodal RL training framework for diffusion & omni models

SGLang is a high-performance serving framework for large language models and multimodal models.

All-in-One Sandbox for AI Agents that combines Browser, Shell, File, MCP and VSCode Server in a single Docker container.

Global Stereochemical Fields for Chiral Graph Transformers

AW-RoPE: analytic-walk rotary position encodings for graphs

Easy to use suite for designing a wide range of protein binder modalities.

My Python scripts to make high-quality figures for publications in top AI conferences and journals.

Official repository of Zatom-1, a general-purpose model for 3D molecules and materials

[ICCV 2025] Official implementation of the paper: REPA-E: Unlocking VAE for End-to-End Tuning of Latent Diffusion Transformers

VenusFold

Implementation of the recurrent looped transformer proposed by Yifan Zhang of Princeton

Agentic RL Training at Scale

Official implementation of "A unified pre-trained deep learning framework for cross-task reaction performance prediction and synthesis planning"

A Unified Language Model to Integrate Biomedical Text with 2D and 3D Molecular Representations

AuK: An Open-Source Foundational Model for Speech Generation and Editing

A tool for retrosynthetic planning

DECIMER Image Transformer is a deep-learning-based tool designed for automated recognition of chemical structure images. Leveraging transformer architectures, the model converts chemical images int…

Free up your Mac, safely. Clears the cache and junk it piles up on its own. Open source, and everything goes to the Trash, so nothing is ever lost.

启智平台的 Agent 驾驶舱：Skill + CLI，一条命令直达。Agent cockpit for the Inspire ML platform: one command, every operation, straight from chat.

siiRL: Shanghai Innovation Institute RL Framework for Advanced LLMs and Multi-Agent Systems

Sharing how attention appears in my mind's eye, for students and those interested in understanding transformers

Official code implementation of *Towards Unified and Lossless Latent Space for 3D Molecular Latent Diffusion Modeling* (NeurIPS 2025).