Generate a THIRDPARTY file with all licenses in a cargo project.

Griffe extension for Pydantic.

Type annotations and runtime checking for shape and dtype of JAX/NumPy/PyTorch/etc. arrays. https://docs.kidger.site/jaxtyping/

A MkDocs plugin that adds zoom, pan, and lightbox functionality to Mermaid diagrams.

Import hook for maturin

Install rust into a cache dir for rust-based builds

A wide string Rust library for converting to and from wide-character strings, including UTF-16 and UTF-32 encoding.

A Python package for easy multiprocessing, but faster than multiprocessing

Flexible and powerful tensor operations for readable and reliable code (for pytorch, jax, TF and others)

Toolbox for molecular animations in Blender, powered by Geometry Nodes.

PINDER: The Protein INteraction Dataset and Evaluation Resource

Protein Ligand INteraction Dataset and Evaluation Resource

An extremely fast Python linter and code formatter, written in Rust.

Modern, extensible Python project management

Hatch plugin for versioning with your preferred VCS

A NumPy port of the foldseek code for encoding protein structures to 3di.

ndarray: an N-dimensional array with array views, multidimensional slicing, and efficient operations

Mac Mouse Fix - Make Your $10 Mouse Better Than an Apple Trackpad!

Sphinx extension for rendering of Jupyter interactive widgets.

cython hooks for hatch

🚴 Call stack profiler for Python. Shows you why your code is slow!

BinaryCIF is a data format for storing text based CIF files using a more efficient binary encoding.

Single-cell analysis in Python. Scales to >100M cells.

This is the development home of the workflow management system Snakemake. For general information, see

A markup-based typesetting system that is powerful and easy to learn.

super-slick Slurm and Condor cluster execution for Python

https://www.sc-best-practices.org

A community-maintained Python framework for creating mathematical animations.