A scanpy extension to analyse single-cell TCR and BCR data.

TCR and BCR assembly from RNA-seq data

BASIC: BCR and TCR assembly from single cell RNA-seq

Cell Painting Gallery

YOLOv4 / Scaled-YOLOv4 / YOLO - Neural Networks for Object Detection (Windows and Linux version of Darknet )

Fix-up scripts for WSL2, mainly networking related

Nextflow workflow for main GENIE processing

Validation and processing of GENIE files

a generalist algorithm for cellular segmentation with human-in-the-loop capabilities

FireCloud Service Selector (FISS) -- Python bindings and CLI for FireCloud execution engine

Multi-omics data normalisation, model fitting and visualisation.

Multi-sample multi-group scRNA-seq analysis tools

Visualization of scRNA-seq data.

A centralized location for storing curated data from cBioPortal

A collaboratively written review paper on deep learning, genomics, and precision medicine

Deep probabilistic analysis of single-cell and spatial omics data

Data dictionary for the GDC

A very simple framework for state-of-the-art Natural Language Processing (NLP)

Hodur is a domain modeling approach and collection of libraries to Clojure. By using Hodur you can define your domain model as data, parse and validate it, and then either consume your model via an…

A Clojure library designed to work with R

Learn how to design large-scale systems. Prep for the system design interview. Includes Anki flashcards.

Seesaw turns the Horror of Swing into a friendly, well-documented, Clojure library

Different and fast approaches to rendering rectangles in your browser

The Pedestal Server-side Libraries

UNMAINTAINED A persistent, relational store inspired by Datomic and DataScript.

Fast, cross-platform, standalone ClojureScript environment

Prototypes for the database migration project at WormBase.