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poloarol/README.md

Salut | Hello 👋,

I’m Paul Wambo, a computational scientist with a background in biochemistry and computer science. I use machine learning, computational modelling, and quantitative methods to investigate complex problems in biology.

My work has taken me across molecular discovery and protein design, genomics and epigenomics, single-cell and spatial biology, and multiplexed imaging. Across these areas, I’m interested in the same fundamental problem: how can we turn complex biological questions and high-dimensional data into computational approaches that help us discover something meaningful?

I enjoy building the computational machinery needed to make that possible, from machine learning models and scientific software to reproducible and scalable analytical workflows. Ultimately, I use computation as a way to ask better questions, explore biological systems, and uncover patterns that would otherwise be difficult to see.

My Github Stats

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  1. BioWorkbench BioWorkbench Public

    BioWorkbench

    Jupyter Notebook

  2. snakemake-vizgen-cell-segmentation snakemake-vizgen-cell-segmentation Public

    A snakemake pipeline to perform cell segmentation on MERFISH spatial transcriptomics data.

    Python

  3. spatial-proteomics-codex spatial-proteomics-codex Public

    HTML

  4. pertpy-perturbation-analysis pertpy-perturbation-analysis Public

    Forked from TaufiaHussain/pertpy-perturbation-analysis

    PertPy-based perturbation analysis pipeline using a CRISPR Perturb-seq dataset with reproducible Python scripts.

    Python

  5. small-molecules small-molecules Public

    Implementation of generative models for the design of small molecules

    Jupyter Notebook 3 1

  6. peptide-descriptors peptide-descriptors Public

    Structural and molecular descriptors for peptides

    Python 1 1