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@qiime2

QIIME 2

Welcome to the QIIME 2 GitHub Organization! 👋

If you're a QIIME 2 user or developer, or are thinking about becoming one, refer to our Support Guidelines for details on how to learn or get help with QIIME 2.

If you're interested in contributing to repositories in the qiime2 GitHub organization, please start by reading our Contributing Guidelines.

This organization is primarily managed by the Caporaso Lab at Northern Arizona University, but has contributors from all over the world. If you have questions that aren't covered in the resources above, the best way to reach us is on the QIIME 2 Forum - it's where we hang out.

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  1. distributions distributions Public

    Python 7 11

  2. docs docs Public archive

    Python 21 58

Repositories

Showing 10 of 80 repositories
  • library Public

    A website for sharing QIIME 2 Plugins

    qiime2/library's past year of commit activity
    Svelte 0 BSD-3-Clause 4 3 2 Updated Sep 23, 2026
  • q2-dada2 Public

    QIIME 2 plugin wrapping DADA2

    qiime2/q2-dada2's past year of commit activity
    Python 24 BSD-3-Clause 42 8 (1 issue needs help) 4 Updated Sep 23, 2026
  • q2-types Public
    qiime2/q2-types's past year of commit activity
    Python 17 BSD-3-Clause 45 26 (2 issues need help) 5 Updated Sep 23, 2026
  • q2-cutadapt Public
    qiime2/q2-cutadapt's past year of commit activity
    Python 4 BSD-3-Clause 18 3 (1 issue needs help) 0 Updated Sep 22, 2026
  • q2-vizard Public

    The first choice of wizard lizards for interactive, generalized microbiome data visualization!

    qiime2/q2-vizard's past year of commit activity
    Python 1 BSD-3-Clause 14 16 2 Updated Sep 22, 2026
  • q2-metadata Public
    qiime2/q2-metadata's past year of commit activity
    Python 3 BSD-3-Clause 18 6 1 Updated Sep 22, 2026
  • distributions Public
    qiime2/distributions's past year of commit activity
    Python 7 BSD-3-Clause 11 6 0 Updated Sep 20, 2026
  • q2templates Public

    Design template package for QIIME 2 Plugins

    qiime2/q2templates's past year of commit activity
    Python 4 BSD-3-Clause 16 0 0 Updated Sep 17, 2026
  • q2view Public

    A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations

    qiime2/q2view's past year of commit activity
    TypeScript 1 BSD-3-Clause 3 2 0 Updated Sep 15, 2026
  • q2 Public
    qiime2/q2's past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Sep 11, 2026