Cell2Sentence: Teaching Large Language Models the Language of Biology

Advanced Retrieval-Augmented Generation (RAG) through practical notebooks, using the power of the Langchain, OpenAI GPTs ,META LLAMA3 ,Agents.

scDeepCluster for Single Cell RNA-seq data

Deep learning-based feature selection for single-cell omics data

scplode: A memory-efficient and fast accessor of single cell adata files

Virtual CRISPR Code and benchmark datasets for predicting CRISPR screen results with LLMs, as described in "Virtual CRISPR: Can LLMs Predict CRISPR Screen Results?" for the BioNLP workshop at ACL 2025