Lists (25)
3rd Party
best practice
collections
Data Best Practices
Data Transferring
database
datavis
Frontend-tools
genetics
helpers
Helper tools for simplifying common procedures.inclusive
infrastructure
Invitae-External
invitae-tools
LLM
messaging
ML
monitoring
Portfolios
psychology
Pytest
SQLAlchemy
tutorials
web
workflow-orchastration
Tools related to the data pipeline: 1. collect (applications), 2. ingest (event queue), 3. store (data lake), 4. compute (stream processing), consume (data science) https://media.licdn.com/dms/image/D5622AQEk3vB6xWEJ_g/feedshare-shrink_2048_1536/0/1700284775210?e=1703116800&v=beta&t=pdw6aOXFBrM-buWqf-iF5VjSMZBqKFflUj6PL-AV7egStars
Create behavioral experiments in a browser using JavaScript
🤖 Chat with your SQL database 📊. Accurate Text-to-SQL Generation via LLMs using Agentic Retrieval 🔄.
Code and website accompanying Farrell & Lewandowsky's (2017) book
Machine Learning in Drug Discovery Resources 2024
CLI tool to generate terraform files from existing infrastructure (reverse Terraform). Infrastructure to Code
Simple, unified interface to multiple Generative AI providers
The open source AI engineering platform for agents, LLMs, and ML models. MLflow enables teams of all sizes to debug, evaluate, monitor, and optimize production-quality AI applications while control…
nf-neuro is a nextflow neuroimaging library maintained by the SCIL team
📦 🐳 Dockerfiles and documentation on tools for public health bioinformatics
Robust Speech Recognition via Large-Scale Weak Supervision
Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtool…
Pangolin is a deep-learning method for predicting splice site strengths.
Generate Pydantic v2 models, dataclasses, TypedDict, and msgspec.Struct from OpenAPI, JSON Schema, GraphQL, Avro, Protobuf, and raw JSON/YAML/CSV.
Python library to parse, format, validate, normalize, and map sequence variants according to HGVS Nomenclature (https://hgvs-nomenclature.org/).
Powerlevel9k was a tool for building a beautiful and highly functional CLI, customized for you. P9k had a substantial impact on CLI UX, and its legacy is now continued by P10k.
A clean book theme for scientific explanations and documentation with Sphinx
Your unofficial guidebook to shell scripting, give this repo a ⭐ if it helped you :)
Kedro is a toolbox for production-ready data science. It uses software engineering best practices to help you create data engineering and data science pipelines that are reproducible, maintainable,…
Python DSL for setting up business intelligence rules that can be configured without code