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Achievement: Public SponsorAchievement: YOLOAchievement: QuickdrawAchievement: Pull Sharkx3Achievement: Arctic Code Vault ContributorAchievement: Starstruckx3

Achievements

Achievement: Public SponsorAchievement: YOLOAchievement: QuickdrawAchievement: Pull Sharkx3Achievement: Arctic Code Vault ContributorAchievement: Starstruckx3

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stephenturner/README.md

Hi, I'm Stephen Turner 👋

  • 🧬 I'm a geneticist and data scientist by training
  • 🏛️ I'm an Associate Professor at the University of Virginia School of Data Science
  • 👨‍🔬 Previously: principal scientist at Colossal Biosciences and Form Bio: de-extinction, conservation, synthetic biology, AI, and genome engineering
  • 🦠 Previously: principal investigator at SigSci in biosecurity, human and microbial genetics, and health security analytics
  • 🏫 Previously: professor in public health at the University of Virginia School of Medicine
  • 👨‍💻 Polyglot; most fluent in R, Python, Bash, and Nextflow
  • 🌐 Website: stephenturner.us
  • 📝 Blog/Newsletter: blog.stephenturner.us
  • 🦋 Bluesky: @stephenturner.us
  • 🎓 Publications: Google Scholar
  • 🤝 LinkedIn: turnersd

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  1. oneliners oneliners Public

    Useful bash one-liners for bioinformatics.

    2k 526

  2. qqman qqman Public

    An R package for creating Q-Q and manhattan plots from GWAS results

    HTML 171 93

  3. kgp kgp Public

    1000 Genomes Project Metadata R Package

    R 20 4

  4. workshops workshops Public

    Biological Data Science Workshops

    CSS 9 11

  5. slimbioinfo slimbioinfo Public

    Lightweight Alpine-based Docker images for common bioinformatics tools

    Dockerfile 4

  6. biorecap biorecap Public

    Retrieve and summarize bioRxiv preprints with a local LLM using ollama

    R 72 10