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  • University of Massachusetts Medical School
  • Worcester, MA

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@dekkerlab @GaleProt @open2c

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bioinformatics toolkit in rust

Rust 92 4 Updated Sep 28, 2025

Minimal CSS Framework for semantic HTML

CSS 15,830 471 Updated Mar 15, 2025

The official repository for tariff

Python 3,129 42 Updated Apr 16, 2025

Bam Read Index - Extract alignments from a bam file by readname

C 27 7 Updated Apr 22, 2024

A tool to index and extract data from gzipped FASTQ files

C++ 2 1 Updated Dec 9, 2021

Lighter web automation with Python

Python 8,048 501 Updated Apr 28, 2025

Codon's bioinformatics module

C++ 54 3 Updated Aug 6, 2025

A high-performance, zero-overhead, extensible Python compiler with built-in NumPy support

Python 15,946 553 Updated Oct 7, 2025

A new markup-based typesetting system that is powerful and easy to learn.

Rust 46,773 1,268 Updated Oct 9, 2025

Powerful and versatile visualization for Python.

Python 746 58 Updated Oct 9, 2025

An extensible, state of the art columnar file format. Formerly at @spiraldb, now an Incubation Stage project at LFAI&Data, part of the Linux Foundation.

Rust 1,797 71 Updated Oct 10, 2025

The Open-Source Email Platform

TypeScript 4,539 264 Updated Oct 2, 2025

Simple way to manage your remote machines and SSH keys

Go 755 10 Updated Sep 30, 2024

Pulumi - Infrastructure as Code in any programming language 🚀

Go 23,955 1,245 Updated Oct 10, 2025

Transform data, train models, and run SQL with marimo — feels like a next-gen reactive notebook, stored as Git-friendly reproducible Python. Deploy as scripts, pipelines, endpoints, and apps. All f…

Python 16,351 718 Updated Oct 10, 2025

A collection of inspiring lists, manuals, cheatsheets, blogs, hacks, one-liners, cli/web tools and more.

189,152 11,678 Updated Nov 19, 2024

Python tools to create and manipulate SVG files

Python 325 88 Updated Jul 28, 2024

A fast, accurate and multilingual fuzzy search library for the frontend.

TypeScript 925 21 Updated Nov 22, 2024

A high-performance BigWig and BigBed library in Rust

Rust 103 8 Updated May 28, 2025
Dockerfile 3 Updated Mar 26, 2025

11-color Palette Generator and API for Tailwind CSS

TypeScript 1,130 68 Updated Sep 13, 2025

Oxbow makes genomic data ready for high-performance analytics.

Rust 140 13 Updated Sep 29, 2025

A General-purpose Task-parallel Programming System using Modern C++

C++ 11,281 1,316 Updated Oct 8, 2025

Collection of userstyles affecting the browser

CSS 4,179 357 Updated Oct 3, 2025

runs multiple inputs through a script/function in parallel using bash coprocs

Shell 177 3 Updated Aug 26, 2025

Get up and running with OpenAI gpt-oss, DeepSeek-R1, Gemma 3 and other models.

Go 153,802 13,356 Updated Oct 10, 2025

BLAS-like Library Instantiation Software Framework

C 2,526 396 Updated Sep 25, 2025

Code at the speed of thought – Zed is a high-performance, multiplayer code editor from the creators of Atom and Tree-sitter.

Rust 66,892 5,494 Updated Oct 9, 2025

An extremely fast Python linter and code formatter, written in Rust.

Rust 42,955 1,572 Updated Oct 9, 2025

Gather statistics on allclose comparisons to measure overall test accuracy

Python 3 Updated Mar 18, 2025
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