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  • University of York
  • York, UK

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@Cloud-SPAN

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9 stars written in C++
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The second version of the Kraken taxonomic sequence classification system

C++ 839 294 Updated Nov 5, 2025

A single molecule sequence assembler for genomes large and small.

C++ 694 179 Updated Sep 4, 2025

a Bioinformatics Application for Navigating De novo Assembly Graphs Easily

C++ 652 108 Updated Dec 3, 2022

adapter trimmer for Oxford Nanopore reads

C++ 375 133 Updated May 8, 2024

SortMeRNA: next-generation sequence filtering and alignment tool

C++ 277 65 Updated Aug 18, 2025

GCTA software

C++ 103 29 Updated Jul 9, 2025

Segmented HAPlotype Estimation and Imputation Tool

C++ 91 10 Updated Aug 30, 2025

Fast and scalable nanopore adaptive sampling

C++ 34 2 Updated Jun 6, 2023
C++ 6 3 Updated Apr 12, 2016