A Code Release for Mip-NeRF 360, Ref-NeRF, and RawNeRF

RawHash is the first mechanism that can accurately and efficiently map raw nanopore signals to large reference genomes (e.g., a human reference genome) in real-time without using powerful computati…

R package for visualization and exploratory analysis of Oxford Nanopore direct RNA seq based polyA predictions

Code examples for running V4L2 USB Cameras on NVIDIA Jetson Developer Kits

The ARTIC fieldbioinformatics pipeline

Nextflow pipeline for analysis of direct RNA Nanopore reads (Cozzuto et al., Front in Genet 2020)

A suite of photonic inverse design challenge problems for topology optimization benchmarking

topobuilder pipeline

Nanopolish polya-moderna for the identification of terminal pentamer in the mRNA-1273 direct RNA sequencing data

Photonic optimization library

GAN-enabled metasuraface design

Signal-level algorithms for MinION data

Adapter trimmer for Oxford Nanopore reads using ab initio method

Continuous Adjoint Optimization with Lumerical, developed at UC Berkeley

code base for analyzing inline holographic images of colloidal spheres

Tools used to analyze data from nanopore-based experiments.

Pyth-Ion Nanopore Analysis

Software for universal camera control and frames acquisition