Stars
AutoGPT is the vision of accessible AI for everyone, to use and to build on. Our mission is to provide the tools, so that you can focus on what matters.
🤗 Transformers: the model-definition framework for state-of-the-art machine learning models in text, vision, audio, and multimodal models, for both inference and training.
GPT4All: Run Local LLMs on Any Device. Open-source and available for commercial use.
Jan is an open source alternative to ChatGPT that runs 100% offline on your computer.
🤗 PEFT: State-of-the-art Parameter-Efficient Fine-Tuning.
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
Making Protein folding accessible to all!
Open-source foundation of the user-sponsored PyMOL molecular visualization system.
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
🧬 gget enables efficient querying of genomic reference databases
A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.
🔬A library of JavaScript components to represent biological data
Customizable workflows based on snakemake and python for the analysis of NGS data
Scientific Large Language Models: A Survey on Biological & Chemical Domains
Primer3 is a command line tool to select primers for polymerase chain reaction (PCR).
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark/bwa-meth + MethylDackel or bwa-mem + rastair
tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies
Documentation and description of AWS iGenomes S3 resource.
An R/Bioconductor package that implements a single-sample molecular phenotyping approach
Example project for integrating igv.js and flask