Microbiome Intelligence
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Repositories
- duckdb-miint Public
- Qiita Public
Qiita is a scalable multi-omic study management, processing, and analysis platform for microbiome data (amplicon, metagenomic, metatranscriptomic, metabolomic, proteomic, etc). Schema informed by existing Qiita data model and BioSample.
- kl-run-preflight Public
SQLite representation of sequencing "samplesheets", with round-trip support for legacy CSV formats
- the-miint.github.io Public
MIINT — Microbiome Intelligence. Umbrella site for the-miint (duckdb-miint docs, Qiita overview).
- sylph Public Forked from bluenote-1577/sylph
ultrafast taxonomic profiling and genome querying for metagenomic samples by abundance-corrected minhash.
- TurboANI Public Forked from jianshu93/TurboANI
Homology-based ANI estimation at unprecedented scales
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