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1. get_phylomarkers get_phylomarkers Public

   Forked from vinuesa/get_phylomarkers

   hosts the code for the get_phylomarkers pipeline, which selects optimal markers for genome phylogenies

   Perl 1

2. db_reformatter db_reformatter Public

   Forked from GenomicaMicrob/db_reformatter

   Script to reformat the EzBioCloud database to be used with mg_classifier

   Shell

3. split_sys_site split_sys_site Public

   A stupid method to split an alignment of protein-coding sequences to synonymous sites and nonsynonymous sites

   R

4. R_script R_script Public

   Some useful R script in my work

   R

5. biom-format biom-format Public

   Forked from biocore/biom-format

   The Biological Observation Matrix (BIOM) Format Project

   Python

6. ncbi-genome-download ncbi-genome-download Public

   Forked from kblin/ncbi-genome-download

   Scripts to download genomes from the NCBI FTP servers

   Python