18s-rrna

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Protist Ribosomal Reference database (PR2) - SSU rRNA gene database

database taxonomy metabarcoding rrna eukaryotes 18s-rrna

Scripts for paper Vaulot et al. 2022

database taxonomy metabarcoding eukaryotes 18s-rrna primers

Shiny application to access metaPR2 database

r shiny-apps metabarcoding 18s-rrna

An R Shiny application to identify cochineal genetic sequences for 12S rRNA, 18S rRNA, or COI.

coi 18s-rrna dactylopius cochineal genetic-barcodes 12s-rrna

A custom bioinformatic workflow for UPDX (Universal Parasite Detection assay) sequences analysis.

linux bioinformatics r parasites taxonomy metagenomics microbiome illumina metabarcoding 18s-rrna

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