MMseqs2: ultra fast and sensitive search and clustering suite
A taxonomy for open source cryptocurrency, blockchain, and decentralized ecosystems
GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.
Bugcrowd’s baseline priority ratings for common security vulnerabilities
Accurate sample inference from amplicon data with single nucleotide resolution
A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV
Rinvex Categorizable is a polymorphic Laravel package, for category management. You can categorize any eloquent model with ease, and utilize the power of Nested Sets, and the awesomeness of Sluggable, and Translatable models out of the box.
Fast taxonomic classification of metagenomic sequencing reads using a protein reference database
Taxonomies used in MISP taxonomy system and can be used by other information sharing tool.
A taxonomic toolbelt for R
This is the repository for the BioCLIP model and the TreeOfLife-10M dataset [CVPR'24 Oral, Best Student Paper].
DeepTime Mammalia：交互式哺乳纲演化树，3D 螺旋序幕 + D3.js 动态时间树，跨越 2 亿年 | Interactive mammalian phylogeny with 3D spiral intro & D3.js dynamic timetree spanning 200 Myr
Application and Python module for average nucleotide identity analyses of microbes.
OneNote (desktop) add-in to manage OneNote pages by page tags
Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.
A universal, industry-neutral taxonomy of cognitive core skills (perception, memory, reasoning, planning, action, verification, learning, governance) for LLMs, SLMs, AI agents, and world models — with schemas, 159 skill cards, benchmarks, and CI.
Contains a list of Popoto.js examples
~ Lightweight, Flexible & Rapid WP Development Framework ~
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