3dslicer

Astronomy (HI) extension for 3DSlicer (https://www.slicer.org/)

3D Slicer extension featuring spacing resampling, fiducial registration, and rigid registration of temporal bone images.

Python scripts for automation of work within 3D Slicer

Calculate Centiloid / CenTauR and other imaging biomarkers in seconds: An open-source 3D Slicer extension and agent-friendly tool for ultra-fast, PET-only brain PET normalization and biomarker quantification across amyloid (Centiloid), tau (CenTauR), FDG, DAT, and other PET modalities.

3D Slicer plugin for automatic segmentation and generation of standardized clinical reports for the most common brain tumors, using MRI volumes

3DSlicer plugin for inpainting lung nodules in 3D chest CT data.

This is the open-source repository for SlicerRoboTMS, one of the two core components of OpenRoboTMS — an open-source robotic platform for navigated Transcranial Magnetic Stimulation (TMS).

My dentistry graduation thesis. It is a work in progress to aggregate all the knowledge usefull for Medical Images processing from 3D printing to FEA, Machine Learning and Biofabrication

3D Slicer extension for Radiotherapy clinical re-irradiation analysis. It features : image registration of RT CT scans , Reirradiation BED/EQD2 calculations and interactive native DVH metrics directly within the Slicer GUI.

3D Modeling of organ structures based on a medical scan of the organ in the form of series of 2D photos

The code here is a rough proof of concept for DataHack Hackathon by lablab.me

A set of tools to analyze the curvature of colon segmentations.

3D Slicer extension for glioma response assessment according to the RANO 2.0 criteria

Ultrasound: conversion from l3d file to mrb 3D Slicer file

Small tool to unpack and prepare MRB (medical reality bundle) files from the 3D Slicer as a supervised deep learning data source.

A tool that helps quickly deliver reconfigurable prosthetic sockets.

Use 3DConnexion SpaceMouse devices in 3D Slicer (IGTLink)