torchio

This repository is an unoffical PyTorch implementation of Medical segmentation in 2D and 3D.

Automatically segment the liver and liver tumors in CT scans with 3D-UNET

An end to end automatic segmentation tool for MRI files, that can identify lungs, bladder, liver, kidney and bone

Automatic segmentation of the liver and liver tumors in CT scans with 3D U-Net.

My submission to the MICCAI Educational Challenge 2020.

Convert a directory of DICOM images to a consolidated NumPy array

RectoMap is a deep learning pipeline for segmenting rectal cancer and mesorectum from T2-weighted MRI and predicting pathological complete response (pCR) after neoadjuvant therapy

AI-based 3D depth sensing from stereo vision systems

This repository implements a 3D U-Net model for segmenting HIE lesions in neonatal MRI scans, exploring various loss functions including Dice, Dice-Focal, Tversky, Hausdorff Distance, and hybrid loss functions. BONBID-HIE dataset is used for this study.

Proyecto Final Integrador Ingeniería Biomédica - Deep Learning para segmentación y clasificación de imágenes médicas

Argomenti di fisica applicata sul torchio idraulico e la bilancia a bracci uguali. Teoria, simulazioni e test integrati per fare pratica nei principi base della fisica.

Lightweight SegFormer3D-inspired 3D Transformer for right-ventricle segmentation in cardiac MRI (evaluated on the public M&Ms-2 multi-center, multi-view dataset).