cBioPortal for Cancer Genomics

Backend server for Genome Nexus

REST API for Annotation and Interpretation of Genetic Variants in Cancer

Personalized reference editor for somatic mutation discovery

A dataset and pre-production project for evaluating drug sensitivity scores across a network and identifying cancer dependency genes. Draws from NetMix and NETPHIX.

Algorithms to detect mutational hotspots

LEGACY: AutoCSA (Automatic Comparative Sequence Analysis) is a mutation detection program designed to detect small mutations (1-50 bases) in capillary sequence traces. The software is capable of detecting both homozygous and heterozygous base substitutions, as well as small insertions and deletions, to a high sensitivity.