cBioPortal for Cancer Genomics

A visualization grammar and GPU-accelerated toolkit for genomic data

React Frontend of cBioPortal 🎉

Scripts and datasets supporting FunVar TCGA/TRACERx Functional Impact Event (FIE) scoring and related analyses.

The HTAN Data Portal

Learn to analyse genomics data from cancer samples with hands-on practical exercises in mutation calling, driver gene identification, mutational signature analysis and RNA deconvolution.

Learn to analyse genomics data from cancer samples with hands-on practical exercises in mutation calling, driver gene identification, mutational signature analysis and RNA deconvolution.

CIViC is an open access, open source, community-driven web resource for Clinical Interpretation of Variants in Cancer

Analysis pipleine to model tumour clonal evolution from WGS data (driver annotation, quality control of copy number calls, subclonal and mutational signature deconvolution)

🐠 Bioinfo Data Ocean Exploration

Formalin artefact filtering of tumour sample VCF files

Human gene annotations for the oncology domain

Detecting various characteristics of glioblastoma using Deep Learning

A quickstart tool for AmpliconArchitect. Enables all steps (alignment, CNV calling, seed interval detection) prior to running AmpliconArchitect, and invokes AmpliconClassifier

Biosynthesiss is an AI-powered biotech platform that repurposes existing drugs using omics data and synthetic biology modeling to uncover new treatments for cancer and rare diseases—faster, cheaper, and scientifically rigorous.

cfDNAPro specializes in standardized and robust cfDNA fragmentomic analysis

🐲 DRAGEN workflow tidying 🔥