A Julia package for handle genome graph in the GFA format.
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Updated
Sep 2, 2022 - Julia
A Julia package for handle genome graph in the GFA format.
Linear-time, low-memory construction of variation graphs
A repository for scoring gliding competitions, that aims to be efficient and accurate.
Print genome sequences as paths in a compacted de Bruijn graph (GFA).
A variation graph implementation that takes GFA as input.
Course Project: Algorithms and Data Structures - pangenome graphs, gfa parsing, analysis and visualization
A Go library for working with Graphical Fragment Assembly format
Genome parser and visualisation
Web-app that handles submitting scan-requests to the Annex.
Line-by-line converter from GFA to RDF (turtle)
Convert structural variants to sequence graphs [ VCF + FASTA ---> GFA ]
Plant Plastid-Mitochondria Pangenome-Graph Analysis Tool
SPARQL endpoint to represent pangenomic data
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