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Apr 5, 2024 - Python
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heritability
Here are 30 public repositories matching this topic...
Python package for partitioning GWAS heritability into cell-intrinsic (node) and cell-cell communication (edge) components from spatial transcriptomics.
python bioinformatics gwas genomics computational-biology statistical-genetics heritability spatial-transcriptomics ld-score-regression cell-cell-communication
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Apr 1, 2026 - Python
This repository contains the R package ugnome which is a collection of utility functions for statistical genetic analyses.
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Aug 24, 2021 - R
INSA Rennes 4EII cpp Labs
cplusplus cpp templates class string-manipulation memory-management constructor memory-allocation references pointers specialization agregation heritability
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Dec 30, 2017 - C
R package for wrangling and summarising 'animal' brms models
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Aug 18, 2020 - R
Ce projet contient des programmes et algorithmes développés en C++, couvrant divers concepts de programmation.
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Mar 28, 2025 - C++
Code to accompany the paper "How accurate can genetic predictions be?" by Dreyfuss, Levner, et al.
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Nov 9, 2017 - R
Developmental version of R package BayesTwin
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Sep 28, 2018 - R
Simulation pipeline: omitted extrinsic frailty inflates intrinsic heritability in calibrate-then-extrapolate mortality models
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Mar 25, 2026 - R
Analysis for the manuscript: 'Coral adaptation to climate change: Meta-analysis reveals high heritability across multiple traits', published in Global Change Biology
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Mar 22, 2025 - HTML
This repository includes scripts used in "Contribution of CRISPRable DNA on human complex traits"
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Aug 29, 2022 - R
Repositório com código e relatórios reprodutíveis do programa de melhoramento de mandioca da Embrapa no âmbito do NextGen Cassava (Year 6 – 2022/2023). Inclui análises de ensaios de campo, caracterização fenotípica, estimação de BLUPs, índices de seleção e integração de características de rendimento, qualidade e tolerância à seca.
genomic-selection heritability plant-breeding drought-tolerance selection-index field-trials phenotypic-data cassava-breeding nextgen-cassava blups multi-environment-trials crop-improvement quality-traits
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Oct 4, 2025 - R
Regional Heritability Analysis is a software package for estimating regional heritability of small genomic segments.
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Sep 26, 2020 - Jupyter Notebook
A heritability-optimized scoring method using multivariate adaptive regression splines that incorporates 75 variant- and gene-level features. RovHer leverages exome-wide association statistics to train models estimating the probability of RV functional impact.
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Feb 23, 2026 - R
Pedigree Relatedness Summary Parameters R package
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Mar 24, 2016 - R
The project focused on the analysis of foxes from 3 different farms and the subsequent presentation of trait heritability results, genetic trends, breeding values and relationship matrix.
python blup data-visualisation r-package covariance-matrix heritability breeding-value genetic-trends
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Jan 31, 2023 - Jupyter Notebook
BioTools is a repository that has many scripts which can be utilized to solve biological problems.
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Jul 16, 2021 - R
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