hic

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Blazing fast toolkit to work with .hic and .cool files

bioinformatics cxx genomics conversion hi-c cooler cli-application hic cxx17 cxx-library hictk 3d-genomics

High-performance stochastic modeling of DNA loop extrusion interactions

bioinformatics cpp tad biology high-performance dna cpp17 hic loop-extrusion stochastic-model topologically-associated-domains

Python bindings for hictk: read and write .cool and .hic files directly from Python

bioinformatics genomics python3 bindings hi-c cooler hic hictk 3d-genomics

R bindings for hictk: read .cool and .hic files directly from R

bioinformatics r genomics bindings hi-c cooler hic hictk 3d-genomics

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