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immune-infiltration

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Steffi8868 / SOLA25_BB103X

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This GitHub repository contains the code used in the data analysis portion of the Bachelor's Degree Project: Identification of an Immune Infiltration Signature in Breast Cancer Subtypes and its Association with Tumor Clinicopathological Characteristics and Patient Outcome by Linn Berglund, Olivia Blomberg, Stephanie Mobedjina, & Alice Åhlund

survival-analysis cox-regression radiotherapy breast-cancer cancer-subtypes pam50 prognostic-biomarkers breast-cancer-classification immune-infiltration immune-deconvolution
  • Updated May 29, 2025
  • R

Colliton / Code-storage

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"This repository contains Python scripts for biological data analysis, including Kaplan-Meier survival analysis, volcano plots for gene expression analysis, heatmaps for immune cell infiltration in murine models treated with Pyrvinium Pamoate, and SQL queries for data extraction and preprocessing."

bioinformatics sql database biology heatmap python3 survival-analysis jupyterlab kaplan-meier lipidomics rna-seq-analysis clinical-data tumour-growth immune-infiltration mice-model pyrvinium-pamoate tumour-analysis
  • Updated Dec 23, 2025
  • Jupyter Notebook

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