kneaddata

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Quality control tool on metagenomic and metatranscriptomic sequencing data, especially data from microbiome experiments.

quality-control tools public bowtie2 python-tools biobakery kneaddata

Intro guide to using DTU HPC, with LSF job scripts for metagenomics workflows using KneadData, MetaPhlAn, and HUMAnN.

bioinformatics hpc lsf metagenomics dtu metaphlan kneaddata humann bsub

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