Database-Integrated Genome Screening (DIGS) tool. Explore the dark genome using BLAST and a relational database.
A prototype framework for expressing automated laboratory protocols originally targeting the Transcriptic API
This study explores morph-specific differences in gene expression and steroid hormone metabolism in ruff sandpipers (Calidris pugnax), focusing on the key enzyme HSD17B2.
Web application for querying data on interferon-stimulated genes (ISGs)
DNA mutation clustering tool for fast detection of likely false-negative DNA variants and likely related mutants in a sequenced population of independently mutagenized individuals. Other uses include analysis of segregating mutants and the detection of problematic samples in a sequenced population.
A collection of summaries and reflective notes from molecular biology courses, including genetics, epigenetics, gene regulation, genome interpretation, stem cells and RNA biology, designed to strengthen fundamental knowledge and bridge classical molecular biology with modern applications in cancer research and bioinformatics.
An R package for inferring Haplotypes from high-density, non-targeted genotyping platforms
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