A large-scale dataset of both raw MRI measurements and clinical MRI images.

DeepInverse: a PyTorch library for solving imaging inverse problems using deep learning

Deep Cascade of Convolutional Neural Networks for MR Image Reconstruction: Implementation & Demo

Normalize MR image intensities in Python

Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain

Python package for signal processing, with emphasis on iterative methods

[MICCAI2022] This is an official PyTorch implementation for A Robust Volumetric Transformer for Accurate 3D Tumor Segmentation

3D image classification using CNN (Convolutional Neural Network)

Comprehensive and open-source library of analysis tools for MRI of the spinal cord.

A high-level, easy-to-deploy non-uniform Fast Fourier Transform in PyTorch.

Attention-Guided Version of 2D UNet for Automatic Brain Tumor Segmentation

Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhancement and segmentation.

Autoencoders for Unsupervised Anomaly Segmentation in Brain MR Images: A Comparative Study

Pulseq in Python

Official Implementation of ResViT: Residual Vision Transformers for Multi-modal Medical Image Synthesis

3D super-resolution using Generative Adversarial Networks

This repository contains the code of LiviaNET, a 3D fully convolutional neural network that was employed in our work: "3D fully convolutional networks for subcortical segmentation in MRI: A large-scale study"

Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)

BIDScoin converts your source-level neuroimaging data to BIDS

Segmentation deep learning ALgorithm based on MONai toolbox: single and multi-label segmentation software developed by QIMP team-Vienna.