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May 30, 2017 - R
#
nmf
Here are 11 public repositories matching this topic...
archR: Identifying promoter sequence architectures de novo using NMF
r scikit-learn discovery r-package nmf unsupervised-machine-learning non-negative-matrix-factorization sequence-architectures promoter-sequence-architectures archr
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Jul 1, 2021 - R
This project, done for GA Tech, explores relationship between health factors and hospitalization in NHANES dataset
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Apr 19, 2019 - R
Code for our ICML '18 paper "Closed-form Marginal Likelihood in Gamma-Poisson Matrix Factorization"
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Sep 3, 2018 - R
seqArchR: Identifying (promoter) sequence architectures de novo using NMF
r clustering scikit-learn r-package nmf unsupervised-machine-learning sequence-analysis nonnegative-matrix-factorization sequence-architectures promoter-sequence-architectures
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Mar 6, 2024 - R
Filling missing data for congressional voting dataset from UCI Machine Learning Repository
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Apr 24, 2019 - R
An R code for classifying GCxGC data based on a NMF algorithm
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Apr 2, 2018 - R
R package for bayesNMf, a computationally efficient Gibbs sampler for Bayesian Poisson NMF which automatically determines the number of latent factors while quantifying uncertainties of the learned matrices.
matrix-factorization bayesian-inference r-package nmf gibbs-sampling non-negative-matrix-factorization mutational-signatures bayesian-nmf
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Oct 26, 2025 - R
An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.
visualization bioinformatics r genomics cancer-genomics clonality somatic-mutations nmf cancer-research bioinformatics-analysis structural-variation tumor-evolution mutational-signatures tumor-heterogeneity signature-extraction nmf-extraction structural-variant-signatures driver-events
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May 23, 2024 - R
🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html
visualization bioinformatics r somatic-variants easy-to-use sbs somatic-mutations cnv nmf cancer-research dbs mutational-signatures copynumber-signatures indel signature-extraction nmf-extraction cosmic-signatures bayesian-nmf
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Nov 30, 2025 - R
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