Read and write TIFF files.
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Updated
May 31, 2026 - Python
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ome-tiff
Here are 9 public repositories matching this topic...
A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, in a parallelised manner.
workflow image nextflow conversion file-format ome-tiff ome zarr bioimage ome-zarr ome-zarr-converter
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Mar 14, 2025 - Python
Feature based image registration for immunofluorescence images
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May 28, 2021 - Python
Supplementary information associated with Besson et al. (2019) ECDP 2019
docker bio-formats omero ome-tiff digital-pathology proceedings whole-slide-imaging supplemental-materials qupath
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Jan 7, 2021 - Python
Multichannel single-cell immunofluorescence analysis with brightfield-refined cell boundaries, nuclear/cytoplasmic quantification, and per-cell co-localization metrics
python numpy tiff image-processing scikit-image image-analysis quantification single-cell microscopy ome-tiff watershed cell-segmentation colocalization brightfield bioimage-analysis dapi immunofluorescence active-contours cytoplasm nuclear-segmentation
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Dec 12, 2025 - Python
Python GUI microscopy file converter for ICS2, IMS, LIF, ND2, ZVI, TIFF, OME-TIFF and OME-Zarr bioimaging datasets.
converter imagej tiff file-converter ims ome-tiff nd2 tif bioimaging lif microscopy-images python-gui zarr zvi bioformats ome-zarr ome-ngff ome-tif microscopy-file-converter microscopy-software
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Jun 9, 2026 - Python
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