The Pharmacogenomic Clinical Annotation Tool

A Python package for pharmacogenomics (PGx) research

A tool to genotype CYP2D6 with WGS data

PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction prediction

This repository is the collection point of reference data for the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G protein-coupled receptors (GPCRs).

Protwis is the backbone of the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G protein-coupled receptors (GPCRs).

Text mining for pharmacogenomic associations for PharmGKB

💊🧬 PharMe - Pharmaceutical insights tailored to your personal genome

A phase-aware pharmacogenomic diplotyper for PacBio datasets

Velodrome combines semi-supervised learning and out-of-distribution generalization (domain generalization) for drug response prediction and pharmacogenomics

A clinical decision-support system to identify pharmacogenomics profiles based on subjects genotype of five core genes. The paper has been published in the Journal of Personalized Medicine.

PGxCorpus, a manually annotated corpus, designed for the extraction of pharmacogenomic relations from text.

R scripts included in a bioinformatics pipeline for differential PGx analysis of cancer drug response

Introduction to R for Bioinformatics

DWFA consensus algorithm for pb-StarPhase

Analyses for the publication titled "Integrating disease and drug-related phenotypes for improved identification of pharmacogenomic variants"

Genome-Wide Association Study (GWAS) and Polygenic Risk Score (PRS) Shiny App!

Knowledge graph construction for pharmacogenomic data integration. Semantic modeling of drug-gene interactions, metabolic pathways, and clinical phenotypes using graph databases and ontology frameworks for precision medicine applications.