ptm
Here are 41 public repositories matching this topic...
Short Text Topic Modeling, JAVA
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May 24, 2020 - Java
Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities
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Sep 24, 2026 - C#
Proteomics Mass Spectrometry Datasets for Machine Learning
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Aug 16, 2024 - Python
The Kinase Library: a Global Atlas of the Human Protein Kinome
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Sep 3, 2026 - Jupyter Notebook
PSI-MOD ontology for modified and unmodified amino acid residues
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Sep 18, 2026 - Python
Construction, quantification, and visualization of proteoform families
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Dec 16, 2024 - C#
An ensemble-based approach for prediction of protein S-nitrosylation sites integrating supervised word embedding and embedding from protein language model
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May 8, 2024 - Python
Code to generate the PTMTorrent dataset
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Jul 25, 2023 - Python
Pipeline for analysing and visualising CyTOF datasets, with a focus on PTM signalling networks.
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Dec 7, 2023 - Python
PTM-X: a prediction tool for Post-Translational Modification cross-talk
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Aug 24, 2021 - Python
Comet-PTM, branch of Comet MS/MS
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Apr 10, 2019 - Objective-C
PTM models for spectre and ACE
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Oct 22, 2021 - Perl
Jupyter notebook and ShinyApp version of the Scop3P Toolkit [bio2byte/scop3p-toolkit](https://hub.docker.com/r/bio2byte/scop3p-toolkit)
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Sep 17, 2026 - HTML
Some phosphoproteomics useful notebooks and sources
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Jun 15, 2022 - Jupyter Notebook
Summarize post-translationally modified amino acid sites, peptides and proteins for Proteome Discoverer output
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Nov 11, 2024 - Python
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