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rna-seq-pipeline

Here are 3 public repositories matching this topic...

apredeus / multi-bacpipe

A convenient pipeline for processing of multi-strain bacterial RNA-Seq experiments

rna-seq bacteria rna-seq-analysis rna-seq-pipeline

Updated Dec 1, 2020
Perl

DKFZ-ODCF / RNAseqWorkflow

Roddy RNA-seq Workflow Plugin

bioinformatics-pipeline rna rna-seq-pipeline roddy

Updated Jun 12, 2024
Perl

FazalLabBCM / TrimMapCount

Trim, map, and count FASTQ reads with icSHAPE (https://github.com/qczhang/icSHAPE), STAR (https://github.com/alexdobin/STAR), and HTSeq (https://github.com/htseq/htseq)

rna-seq-pipeline rna-alignment

Updated Nov 29, 2022
Perl

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