filter, sample, FastQ/BAM, summarise BAM to UMI matrix
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Apr 8, 2025 - C
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scrna-seq
Here are 6 public repositories matching this topic...
Map cell barcode + UMI-level read blocks to overlapping exons.
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Nov 11, 2025 - C
Recovery of transcriptome subsets from pooled single cell RNA sequencing libraries
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Nov 29, 2018 - C
A collection of tools to process single-cell omics datasets.
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May 29, 2025 - C
Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.
validation ngs sequencing scrna-seq umi single-cell fastq high-throughput-sequencing barcodes 10x drop-seq fastq-files dge umi-count fastq-filterpair digital-gene-expression fastq-validation
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Jun 18, 2025 - C
Single-cell Transcriptome and Regulome Analysis Pipeline
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Mar 6, 2023 - C
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